Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PIGM	HGNC:18858 (HGNC) 93183 (Entrez Gene) 610273 (OMIM) PIGM (Alliance of Genome Resources)	Chr1 q23.2	Chr1:160024953-160031990 (-) GRCh38		Q9H3S5 (UniProt | EBI) NM_145167 (RefSeq)
mouse	Pigm	MGI:1914806 (MGI) 67556 (Entrez Gene) Gene Tree Pigm (Alliance of Genome Resources)	Chr1 79.73 cM	Chr1:172204113-172211666 (+) GRCm39		ENSMUSG00000050229 (Ensembl Gene Model) ENSMUSP00000052838 (Ensembl) ENSMUST00000052455 (Ensembl)
rat	Pigm	RGD:71041 (Rat Genome Database) 79112 (Entrez Gene) Pigm (Alliance of Genome Resources)	Chr13 q24			Q9EQY6 (UniProt | EBI) NM_024144 (RefSeq)
zebrafish	pigm	ZDB-GENE-040426-1393 (Zebrafish Model Organism Database) 393361 (Entrez Gene) pigm (Alliance of Genome Resources)	Chr24			Q7T310 (UniProt | EBI) NM_200390 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.