Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SAT1	HGNC:10540 (HGNC) 6303 (Entrez Gene) 313020 (OMIM) SAT1 (Alliance of Genome Resources)	ChrX p22.11	ChrX:23783173-23786210 (+) GRCh38		P21673 (UniProt | EBI) NM_002970 (RefSeq)
mouse	Sat1	MGI:98233 (MGI) 20229 (Entrez Gene) Gene Tree Sat1 (Alliance of Genome Resources)	ChrX 72.38 cM	ChrX:153996128-153999345 (-) GRCm39		20229 (NCBI Gene Model) P48026 (UniProt | EBI) NR_189657 (RefSeq)
rat	Sat1	RGD:1586174 (Rat Genome Database) 302642 (Entrez Gene) Sat1 (Alliance of Genome Resources)	ChrX q21			NP_001007668 (RefSeq) NM_001007667 (RefSeq)
zebrafish	sat1a.1	ZDB-GENE-050913-41 (Zebrafish Model Organism Database) 565700 (Entrez Gene) sat1a.1 (Alliance of Genome Resources)	Chr5			NP_001025370 (RefSeq) NM_001030199 (RefSeq)
	sat1a.2	ZDB-GENE-040704-4 (Zebrafish Model Organism Database) 431716 (Entrez Gene) sat1a.2 (Alliance of Genome Resources)	Chr5			NP_001002169 (RefSeq) NM_001002169 (RefSeq)
	sat1b	ZDB-GENE-041001-39 (Zebrafish Model Organism Database) 567881 (Entrez Gene) sat1b (Alliance of Genome Resources)	Chr24			NP_001087217 (RefSeq) NM_001093748 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.