Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRIM55	HGNC:14215 (HGNC) 84675 (Entrez Gene) 606469 (OMIM) TRIM55 (Alliance of Genome Resources)	Chr8 q13.1	Chr8:66113351-66175485 (+) GRCh38		Q9BYV6 (UniProt | EBI) NM_184087 (RefSeq)
mouse	Trim55	MGI:3036269 (MGI) 381485 (Entrez Gene) Gene Tree Trim55 (Alliance of Genome Resources)	Chr3 5.65 cM	Chr3:19698638-19746585 (+) GRCm39		ENSMUSG00000060913 (Ensembl Gene Model) ENSMUSP00000029139 (Ensembl) ENSMUST00000029139 (Ensembl)
rat	Trim55	RGD:1306943 (Rat Genome Database) 365751 (Entrez Gene) Trim55 (Alliance of Genome Resources)	Chr2 q24			Q5PQN5 (UniProt | EBI) NM_001012218 (RefSeq)
zebrafish	trim55a	ZDB-GENE-040718-50 (Zebrafish Model Organism Database) 436631 (Entrez Gene) trim55a (Alliance of Genome Resources)	Chr2			NP_001002358 (RefSeq) NM_001002358 (RefSeq)
	trim55b	ZDB-GENE-060312-37 (Zebrafish Model Organism Database) 664753 (Entrez Gene) trim55b (Alliance of Genome Resources)	Chr24			NP_001035071 (RefSeq) NM_001039982 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.