Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PLTP	HGNC:9093 (HGNC) 5360 (Entrez Gene) 172425 (OMIM) PLTP (Alliance of Genome Resources)	Chr20 q13.12	Chr20:45898620-45912155 (-) GRCh38		P55058 (UniProt | EBI) NM_182676 (RefSeq)
mouse	Pltp	MGI:103151 (MGI) 18830 (Entrez Gene) Gene Tree Pltp (Alliance of Genome Resources)	Chr2 85.27 cM	Chr2:164681441-164699564 (-) GRCm39	dry eye syndrome	18830 (NCBI Gene Model) P55065 (UniProt | EBI) NM_001420693 (RefSeq)
rat	Pltp	RGD:1306695 (Rat Genome Database) 296371 (Entrez Gene) Pltp (Alliance of Genome Resources)	Chr3 q42			NP_001162015 (RefSeq) NM_001168543 (RefSeq)
zebrafish	pltp	ZDB-GENE-040801-22 (Zebrafish Model Organism Database) 445125 (Entrez Gene) pltp (Alliance of Genome Resources)	Chr6			NP_001003519 (RefSeq) NM_001003519 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.