Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PPP2R5C	HGNC:9311 (HGNC) 5527 (Entrez Gene) 601645 (OMIM) PPP2R5C (Alliance of Genome Resources)	Chr14 q32.31	Chr14:101760573-101927992 (+) GRCh38		Q13362 (UniProt | EBI) NM_178588 (RefSeq)
mouse	Ppp2r5c	MGI:1349475 (MGI) 26931 (Entrez Gene) Gene Tree Ppp2r5c (Alliance of Genome Resources)	Chr12 60.56 cM	Chr12:110413554-110549496 (+) GRCm39		ENSMUSG00000017843 (Ensembl Gene Model) ENSMUSP00000082053 (Ensembl) ENSMUST00000084985 (Ensembl)
rat	Ppp2r5c	RGD:1585097 (Rat Genome Database) 691318 (Entrez Gene) Ppp2r5c (Alliance of Genome Resources)	Chr6 q32			NP_001402057 (RefSeq) NM_001415128 (RefSeq)
zebrafish	ppp2r5ca	ZDB-GENE-120406-9 (Zebrafish Model Organism Database) 100005981 (Entrez Gene) ppp2r5ca (Alliance of Genome Resources)	Chr17			XP_001344871 (RefSeq)
	ppp2r5cb	ZDB-GENE-041014-4 (Zebrafish Model Organism Database) 557208 (Entrez Gene) ppp2r5cb (Alliance of Genome Resources)	Chr20			NP_001038286 (RefSeq) NM_001044821 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.