Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LRTM2	HGNC:32443 (HGNC) 654429 (Entrez Gene) LRTM2 (Alliance of Genome Resources)	Chr12 p13.33	Chr12:1820267-1836753 (+) GRCh38		Q8N967 (UniProt | EBI) NM_001163925 (RefSeq)
mouse	Lrtm2	MGI:2141485 (MGI) 211187 (Entrez Gene) Gene Tree Lrtm2 (Alliance of Genome Resources)	Chr6 56.73 cM	Chr6:119292094-119307727 (-) GRCm39		ENSMUSG00000055003 (Ensembl Gene Model) ENSMUSP00000108376 (Ensembl) ENSMUST00000112756 (Ensembl)
rat	Lrtm2	RGD:1587001 (Rat Genome Database) 680883 (Entrez Gene) Lrtm2 (Alliance of Genome Resources)	Chr4 q42			NP_001102900 (RefSeq) NM_001109430 (RefSeq)
zebrafish	lrtm2a	ZDB-GENE-041210-218 (Zebrafish Model Organism Database) 557289 (Entrez Gene) lrtm2a (Alliance of Genome Resources)	Chr4			XP_021330936 (RefSeq)
	lrtm2b	ZDB-GENE-131121-544 (Zebrafish Model Organism Database) 101887010 (Entrez Gene) lrtm2b (Alliance of Genome Resources)	Chr25			XP_005163087 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.