Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTCHD3	HGNC:24776 (HGNC) 374308 (Entrez Gene) 611791 (OMIM) PTCHD3 (Alliance of Genome Resources)	Chr10 p12.1	Chr10:27397121-27414368 (-) GRCh38		Q3KNS1 (UniProt | EBI) NM_001034842 (RefSeq)
mouse	Ptchd3	MGI:1921925 (MGI) 74675 (Entrez Gene) Gene Tree Ptchd3 (Alliance of Genome Resources)	Chr11 87.9 cM	Chr11:121721073-121734249 (+) GRCm39		ENSMUSG00000039198 (Ensembl Gene Model) ENSMUSP00000035709 (Ensembl) ENSMUST00000036690 (Ensembl)
rat	Ptchd3	RGD:1590039 (Rat Genome Database) 688333 (Entrez Gene) Ptchd3 (Alliance of Genome Resources)	Chr10			M0R3Q7 (UniProt | EBI) NM_001408928 (RefSeq)
zebrafish	ptchd3a	ZDB-GENE-111215-6 (Zebrafish Model Organism Database) 100334931 (Entrez Gene) ptchd3a (Alliance of Genome Resources)	Chr24			XP_017209492 (RefSeq)
	si:ch211-250m6.7	ZDB-GENE-041210-239 (Zebrafish Model Organism Database) 565624 (Entrez Gene) si:ch211-250m6.7 (Alliance of Genome Resources)	Chr4			XP_021327233 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.