Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CDH9	HGNC:1768 (HGNC) 1007 (Entrez Gene) 609974 (OMIM) CDH9 (Alliance of Genome Resources)	Chr5 p14.1	Chr5:26880597-27121150 (-) GRCh38		Q9ULB4 (UniProt | EBI) NM_016279 (RefSeq)
mouse	Cdh9	MGI:107433 (MGI) 12565 (Entrez Gene) Gene Tree Cdh9 (Alliance of Genome Resources)	Chr15 7.91 cM	Chr15:16728842-16857180 (+) GRCm39		ENSMUSG00000025370 (Ensembl Gene Model) ENSMUSP00000026432 (Ensembl) ENSMUST00000026432 (Ensembl)
rat	Cdh9	RGD:1308343 (Rat Genome Database) 29163 (Entrez Gene) Cdh9 (Alliance of Genome Resources)	Chr2 q21			NP_001162101 (RefSeq) NM_001168630 (RefSeq)
zebrafish	cdh6	ZDB-GENE-050320-92 (Zebrafish Model Organism Database) 541393 (Entrez Gene) cdh6 (Alliance of Genome Resources)	Chr2			NP_001013538 (RefSeq) NM_001013520 (RefSeq)
	cdh10a	ZDB-GENE-060614-1 (Zebrafish Model Organism Database) 568370 (Entrez Gene) cdh10a (Alliance of Genome Resources)	Chr2			NP_001034722 (RefSeq) NM_001039633 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.