Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CSMD1	HGNC:14026 (HGNC) 64478 (Entrez Gene) 608397 (OMIM) CSMD1 (Alliance of Genome Resources)	Chr8 p23.2	Chr8:2935353-4994972 (-) GRCh38		Q96PZ7 (UniProt | EBI) NM_033225 (RefSeq)
mouse	Csmd1	MGI:2137383 (MGI) 94109 (Entrez Gene) Gene Tree Csmd1 (Alliance of Genome Resources)	Chr8 8.38 cM	Chr8:15942537-17585602 (-) GRCm39	schizophrenia	ENSMUSG00000060924 (Ensembl Gene Model) ENSMUSP00000080751 (Ensembl) ENSMUST00000082104 (Ensembl)
rat	Csmd1	RGD:1305103 (Rat Genome Database) 364634 (Entrez Gene) Csmd1 (Alliance of Genome Resources)	Chr16 q12.5			NP_001032404 (RefSeq) NM_001037327 (RefSeq)
zebrafish	csmd1a	ZDB-GENE-050417-402 (Zebrafish Model Organism Database) 550553 (Entrez Gene) csmd1a (Alliance of Genome Resources)	Chr13			NP_001017855 (RefSeq) NM_001017855 (RefSeq)
	csmd1b	ZDB-GENE-140106-66 (Zebrafish Model Organism Database) 100534721 (Entrez Gene) csmd1b (Alliance of Genome Resources)	Chr13

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.