Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IQCJ-SCHIP1	HGNC:38842 (HGNC) 100505385 (Entrez Gene) IQCJ-SCHIP1 (Alliance of Genome Resources)	Chr	Chr3:158962235-159897359 (+) GRCh38		B3KU38 (UniProt | EBI) NM_001414414 (RefSeq)
mouse	Iqschfp	MGI:5439400 (MGI) 100505386 (Entrez Gene) Gene Tree Iqschfp (Alliance of Genome Resources)	Chr3 Syntenic	Chr3:67799565-68533799 (+) GRCm39		ENSMUSG00000102422 (Ensembl Gene Model) ENSMUSP00000138212 (Ensembl) ENSMUST00000182006 (Ensembl)
rat	Schip1	RGD:1309962 (Rat Genome Database) 295105 (Entrez Gene) Schip1 (Alliance of Genome Resources)	Chr2 q32			NP_001094136 (RefSeq) NM_001100666 (RefSeq)
zebrafish	schip1	ZDB-GENE-050417-466 (Zebrafish Model Organism Database) 550605 (Entrez Gene) schip1 (Alliance of Genome Resources)	Chr15			NP_001017906 (RefSeq) NM_001017906 (RefSeq)
	zgc:153615	ZDB-GENE-061110-79 (Zebrafish Model Organism Database) 777747 (Entrez Gene) zgc:153615 (Alliance of Genome Resources)	Chr2			NP_001071259 (RefSeq) NM_001077791 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.