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Vertebrate Homology
Source
Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IRGC HGNC:28835 (HGNC)
56269 (Entrez Gene)
620634 (OMIM)
IRGC (Alliance of Genome Resources)
Chr19 q13.31 Chr19:43716076-43720021 (+)
GRCh38
Q6NXR0 (UniProt | EBI)
NM_019612 (RefSeq)
mouse Irgc MGI:2685948 (MGI)
210145 (Entrez Gene)
Gene Tree
Irgc (Alliance of Genome Resources)
Chr7 10.74 cM Chr7:24131344-24145107 (-)
GRCm39
210145 (NCBI Gene Model)
Q8C262 (UniProt | EBI)
NM_199013 (RefSeq)
rat Irgc RGD:1311107 (Rat Genome Database)
308428 (Entrez Gene)
Irgc (Alliance of Genome Resources)
Chr1 q21 Q6AYF9 (UniProt | EBI)
NM_001014016 (RefSeq)
zebrafish irgf1 ZDB-GENE-051212-5 (Zebrafish Model Organism Database)
100137101 (Entrez Gene)
irgf1 (Alliance of Genome Resources)
Chr19 NP_001307352 (RefSeq)
NM_001320423 (RefSeq)
irgf3 ZDB-GENE-051212-6 (Zebrafish Model Organism Database)
797731 (Entrez Gene)
irgf3 (Alliance of Genome Resources)
Chr19 XP_001338197 (RefSeq)
si:ch73-171o20.1 ZDB-GENE-140106-80 (Zebrafish Model Organism Database)
563833 (Entrez Gene)
si:ch73-171o20.1 (Alliance of Genome Resources)
Chr19 XP_017207834 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory