Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC39A1	HGNC:12876 (HGNC) 27173 (Entrez Gene) 604740 (OMIM) SLC39A1 (Alliance of Genome Resources)	Chr1 q21.3	Chr1:153959099-153968184 (-) GRCh38		Q9NY26 (UniProt | EBI) NM_001271958 (RefSeq)
mouse	Slc39a1	MGI:1353474 (MGI) 30791 (Entrez Gene) Gene Tree Slc39a1 (Alliance of Genome Resources)	Chr3 39.21 cM	Chr3:90155512-90160923 (+) GRCm39		30791 (NCBI Gene Model) Q9QZ03 (UniProt | EBI) NM_001411505 (RefSeq)
rat	Slc39a1	RGD:1305241 (Rat Genome Database) 361986 (Entrez Gene) Slc39a1 (Alliance of Genome Resources)	Chr2 q34			NP_001128049 (RefSeq) NM_001134577 (RefSeq)
zebrafish	slc39a1	ZDB-GENE-030131-9917 (Zebrafish Model Organism Database) 321324 (Entrez Gene) slc39a1 (Alliance of Genome Resources)	Chr7			P59889 (UniProt | EBI) NM_212583 (RefSeq)
	slc39a3	ZDB-GENE-060315-9 (Zebrafish Model Organism Database) 792986 (Entrez Gene) slc39a3 (Alliance of Genome Resources)	ChrUN			NP_001074088 (RefSeq) NM_001080619 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.