Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRPM5	HGNC:14323 (HGNC) 29850 (Entrez Gene) 604600 (OMIM) TRPM5 (Alliance of Genome Resources)	Chr11 p15.5	Chr11:2403991-2444514 (-) GRCh38		Q9NZQ8 (UniProt | EBI) NM_014555 (RefSeq)
mouse	Trpm5	MGI:1861718 (MGI) 56843 (Entrez Gene) Gene Tree Trpm5 (Alliance of Genome Resources)	Chr7 88.11 cM	Chr7:142625266-142648379 (-) GRCm39		56843 (NCBI Gene Model) Q9JJH7 (UniProt | EBI) NM_020277 (RefSeq)
rat	Trpm5	RGD:1310620 (Rat Genome Database) 365391 (Entrez Gene) Trpm5 (Alliance of Genome Resources)	Chr1 q42			NP_001178825 (RefSeq) NM_001191896 (RefSeq)
zebrafish	trpm5	ZDB-GENE-060503-736 (Zebrafish Model Organism Database) 557722 (Entrez Gene) trpm5 (Alliance of Genome Resources)	Chr7			S5UH55 (UniProt | EBI) NM_001128239 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.