Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Or1x2	MGI:1333750 (MGI) 18354 (Entrez Gene) Gene Tree Or1x2 (Alliance of Genome Resources)	Chr11 30.97 cM	Chr11:50917831-50918772 (+) GRCm39		18354 (NCBI Gene Model) NP_035127 (RefSeq) NM_010997 (RefSeq)
rat	Or1x2	RGD:1332843 (Rat Genome Database) 287259 (Entrez Gene) Or1x2 (Alliance of Genome Resources)	Chr10 q22			NP_001000004 (RefSeq) NM_001000004 (RefSeq)
	Or1x2b	RGD:1333846 (Rat Genome Database) 405063 (Entrez Gene) Or1x2b (Alliance of Genome Resources)	Chr10 q22			NP_001000785 (RefSeq) NM_001000785 (RefSeq)
zebrafish	or42a9	ZDB-GENE-070806-75 (Zebrafish Model Organism Database) 100148707 (Entrez Gene) or42a9 (Alliance of Genome Resources)	Chr10			XP_021329892 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.