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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CIITA HGNC:7067 (HGNC)
4261 (Entrez Gene)
600005 (OMIM)
CIITA (Alliance of Genome Resources)
Chr16 p13.13 Chr16:10866206-10943021 (+)
GRCh38
Addison's disease
juvenile rheumatoid arthritis
MHC class II deficiency
multiple sclerosis
myocardial infarction
rheumatoid arthritis
systemic lupus erythematosus
P33076 (UniProt | EBI)
NM_001379333 (RefSeq)
mouse Ciita MGI:108445 (MGI)
12265 (Entrez Gene)
Gene Tree
Ciita (Alliance of Genome Resources)
Chr16 5.65 cM Chr16:10297923-10346282 (+)
GRCm39
MHC class II deficiency
osteoporosis
ENSMUSG00000022504 (Ensembl Gene Model)
ENSMUSP00000155517 (Ensembl)
ENSMUST00000230395 (Ensembl)
rat Ciita RGD:619813 (Rat Genome Database)
85483 (Entrez Gene)
Ciita (Alliance of Genome Resources)
Chr10 q11 NP_001257732 (RefSeq)
NM_053529 (RefSeq)
zebrafish ciita ZDB-GENE-071116-6 (Zebrafish Model Organism Database)
100003537 (Entrez Gene)
ciita (Alliance of Genome Resources)
Chr3 XP_005163972 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory