Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PCTP	HGNC:8752 (HGNC) 58488 (Entrez Gene) 606055 (OMIM) PCTP (Alliance of Genome Resources)	Chr17 q22	Chr17:55751051-55852715 (+) GRCh38		Q9UKL6 (UniProt | EBI) NM_001102402 (RefSeq)
mouse	Pctp	MGI:107375 (MGI) 18559 (Entrez Gene) Gene Tree Pctp (Alliance of Genome Resources)	Chr11 54.7 cM	Chr11:89873491-89893720 (-) GRCm39		ENSMUSG00000020553 (Ensembl Gene Model) ENSMUSP00000020864 (Ensembl) ENSMUST00000020864 (Ensembl)
rat	Pctp	RGD:3276 (Rat Genome Database) 29510 (Entrez Gene) Pctp (Alliance of Genome Resources)	Chr10 q26			P53809 (UniProt | EBI) NM_017225 (RefSeq)
zebrafish	pctp	ZDB-GENE-081022-182 (Zebrafish Model Organism Database) 566726 (Entrez Gene) pctp (Alliance of Genome Resources)	Chr3			NP_001124258 (RefSeq) NM_001130786 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.