Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC1A2	HGNC:10940 (HGNC) 6506 (Entrez Gene) 600300 (OMIM) SLC1A2 (Alliance of Genome Resources)	Chr11 p13	Chr11:35251205-35420507 (-) GRCh38	developmental and epileptic encephalopathy 41	P43004 (UniProt | EBI) NM_004171 (RefSeq)
mouse	Slc1a2	MGI:101931 (MGI) 20511 (Entrez Gene) Gene Tree Slc1a2 (Alliance of Genome Resources)	Chr2 54.13 cM	Chr2:102489004-102621129 (+) GRCm39		ENSMUSG00000005089 (Ensembl Gene Model) ENSMUSP00000079100 (Ensembl) ENSMUST00000080210 (Ensembl)
rat	Slc1a2	RGD:3697 (Rat Genome Database) 29482 (Entrez Gene) Slc1a2 (Alliance of Genome Resources)	Chr3 q32			P31596 (UniProt | EBI) NM_017215 (RefSeq)
zebrafish	slc1a2a	ZDB-GENE-100422-11 (Zebrafish Model Organism Database) 560802 (Entrez Gene) slc1a2a (Alliance of Genome Resources)	Chr7			NP_001177234 (RefSeq) NM_001190305 (RefSeq)
	slc1a2b	ZDB-GENE-030131-7779 (Zebrafish Model Organism Database) 335836 (Entrez Gene) slc1a2b (Alliance of Genome Resources)	Chr25			NP_956273 (RefSeq) NM_199979 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.