Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SPATA45	HGNC:33709 (HGNC) 149643 (Entrez Gene) SPATA45 (Alliance of Genome Resources)	Chr1 q32.3	Chr1:212830141-212847649 (-) GRCh38		Q537H7 (UniProt | EBI) NM_001024601 (RefSeq)
mouse	Spata45	MGI:1922808 (MGI) 75558 (Entrez Gene) Gene Tree Spata45 (Alliance of Genome Resources)	Chr1 96.28 cM	Chr1:190768836-190775139 (+) GRCm39		ENSMUSG00000057072 (Ensembl Gene Model) ENSMUSP00000141721 (Ensembl) ENSMUST00000192151 (Ensembl)
rat	SPATA45	RGD:1593182 (Rat Genome Database) 498316 (Entrez Gene) SPATA45 (Alliance of Genome Resources)	Chr13			NP_001102555 (RefSeq) NM_001109085 (RefSeq)
zebrafish	spata45	ZDB-GENE-041014-353 (Zebrafish Model Organism Database) 100034413 (Entrez Gene) spata45 (Alliance of Genome Resources)	Chr20			Q5RGS7 (UniProt | EBI) NM_001423825 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.