Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LHX6	HGNC:21735 (HGNC) 26468 (Entrez Gene) 608215 (OMIM) LHX6 (Alliance of Genome Resources)	Chr9 q33.2	Chr9:122202577-122229626 (-) GRCh38		Q9UPM6 (UniProt | EBI) NM_001242333 (RefSeq)
mouse	Lhx6	MGI:1306803 (MGI) 16874 (Entrez Gene) Gene Tree Lhx6 (Alliance of Genome Resources)	Chr2 24.17 cM	Chr2:35971965-35995420 (-) GRCm39		ENSMUSG00000026890 (Ensembl Gene Model) ENSMUSP00000108584 (Ensembl) ENSMUST00000112960 (Ensembl)
rat	Lhx6	RGD:1306174 (Rat Genome Database) 311901 (Entrez Gene) Lhx6 (Alliance of Genome Resources)	Chr3 p11			NP_001101307 (RefSeq) NM_001107837 (RefSeq)
zebrafish	lhx6a	ZDB-GENE-041025-1 (Zebrafish Model Organism Database) 445565 (Entrez Gene) lhx6a (Alliance of Genome Resources)	Chr10			NP_001004015 (RefSeq) NM_001004015 (RefSeq)
	lhx6b	ZDB-GENE-060531-41 (Zebrafish Model Organism Database) 557579 (Entrez Gene) lhx6b (Alliance of Genome Resources)	Chr5			XP_068077476 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.