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Vertebrate Homology
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Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRAMEF1 HGNC:28840 (HGNC)
65121 (Entrez Gene)
PRAMEF1 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12791397-12796628 (+)
GRCh38
O95521 (UniProt | EBI)
NM_023013 (RefSeq)
PRAMEF2 HGNC:28841 (HGNC)
65122 (Entrez Gene)
PRAMEF2 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12857086-12861909 (+)
GRCh38
O60811 (UniProt | EBI)
NM_023014 (RefSeq)
PRAMEF4 HGNC:31971 (HGNC)
400735 (Entrez Gene)
PRAMEF4 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12879212-12886201 (-)
GRCh38
O60810 (UniProt | EBI)
NM_001009611 (RefSeq)
PRAMEF5 HGNC:27995 (HGNC)
343068 (Entrez Gene)
PRAMEF5 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13254198-13263435 (+)
GRCh38
Q5TYX0 (UniProt | EBI)
NM_001013407 (RefSeq)
PRAMEF6 HGNC:30583 (HGNC)
440561 (Entrez Gene)
PRAMEF6 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12938472-12947580 (-)
GRCh38
Q5VXH4 (UniProt | EBI)
NM_001010889 (RefSeq)
PRAMEF7 HGNC:28415 (HGNC)
441871 (Entrez Gene)
PRAMEF7 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12916610-12920751 (+)
GRCh38
Q5VXH5 (UniProt | EBI)
NM_001012277 (RefSeq)
PRAMEF8 HGNC:24074 (HGNC)
391002 (Entrez Gene)
PRAMEF8 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13281304-13285137 (-)
GRCh38
Q5VWM4 (UniProt | EBI)
NM_001012276 (RefSeq)
PRAMEF9 HGNC:27996 (HGNC)
343070 (Entrez Gene)
PRAMEF9 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13171848-13179459 (+)
GRCh38
P0DUQ2 (UniProt | EBI)
NM_001010890 (RefSeq)
PRAMEF10 HGNC:27997 (HGNC)
343071 (Entrez Gene)
PRAMEF10 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12892896-12898270 (-)
GRCh38
O60809 (UniProt | EBI)
NM_001039361 (RefSeq)
PRAMEF11 HGNC:14086 (HGNC)
440560 (Entrez Gene)
PRAMEF11 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12824605-12831410 (-)
GRCh38
O60813 (UniProt | EBI)
NM_001146344 (RefSeq)
PRAMEF12 HGNC:22125 (HGNC)
390999 (Entrez Gene)
PRAMEF12 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:12773738-12777906 (+)
GRCh38
O95522 (UniProt | EBI)
NM_001080830 (RefSeq)
PRAMEF13 HGNC:13262 (HGNC)
400736 (Entrez Gene)
PRAMEF13 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13196188-13201409 (-)
GRCh38
Q5VWM6 (UniProt | EBI)
NM_001291380 (RefSeq)
PRAMEF15 HGNC:26764 (HGNC)
653619 (Entrez Gene)
PRAMEF15 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13315581-13322598 (+)
GRCh38
P0DUQ1 (UniProt | EBI)
NM_001098376 (RefSeq)
PRAMEF17 HGNC:29485 (HGNC)
391004 (Entrez Gene)
PRAMEF17 (Alliance of Genome Resources)
Chr1 p36.21 Q5VTA0 (UniProt | EBI)
NM_001099851 (RefSeq)
PRAMEF18 HGNC:30693 (HGNC)
391003 (Entrez Gene)
PRAMEF18 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13222695-13226154 (-)
GRCh38
Q5VWM3 (UniProt | EBI)
NM_001024659 (RefSeq)
PRAMEF19 HGNC:24908 (HGNC)
645414 (Entrez Gene)
PRAMEF19 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13368431-13371947 (-)
GRCh38
Q5SWL8 (UniProt | EBI)
NM_001099790 (RefSeq)
PRAMEF20 HGNC:25224 (HGNC)
645425 (Entrez Gene)
PRAMEF20 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13410450-13421328 (+)
GRCh38
Q5VT98 (UniProt | EBI)
NM_001099852 (RefSeq)
PRAMEF25 HGNC:49179 (HGNC)
441873 (Entrez Gene)
PRAMEF25 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13068677-13077884 (+)
GRCh38
A6NGN4 (UniProt | EBI)
NM_001310134 (RefSeq)
PRAMEF26 HGNC:49178 (HGNC)
645359 (Entrez Gene)
PRAMEF26 (Alliance of Genome Resources)
Chr1 p36.21 H0Y7S4 (UniProt | EBI)
NM_001306072 (RefSeq)
PRAMEF27 HGNC:51234 (HGNC)
101929983 (Entrez Gene)
PRAMEF27 (Alliance of Genome Resources)
Chr Chr1:13049476-13056575 (-)
GRCh38
A3QJZ7 (UniProt | EBI)
NM_001300891 (RefSeq)
PRAMEF33 HGNC:49193 (HGNC)
645382 (Entrez Gene)
PRAMEF33 (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13303539-13308907 (+)
GRCh38
A0A0G2JMD5 (UniProt | EBI)
NM_001291381 (RefSeq)
mouse Pramel53 MGI:3647817 (MGI)
622744 (Entrez Gene)
Gene Tree
Pramel53 (Alliance of Genome Resources)
Chr5 47.29 cM Chr5:94224244-94228794 (+)
GRCm39
ENSMUSG00000072821 (Ensembl Gene Model)
ENSMUSP00000119594 (Ensembl)
ENSMUST00000139828 (Ensembl)
rat Pramef8-ps2 RGD:1587867 (Rat Genome Database)
685907 (Entrez Gene)
Pramef8-ps2 (Alliance of Genome Resources)
Chr14
Pramef8l1 RGD:1561226 (Rat Genome Database)
501899 (Entrez Gene)
Pramef8l1 (Alliance of Genome Resources)
Chr14 p22 NP_001102799 (RefSeq)
NM_001109329 (RefSeq)
Pramef8l3 RGD:1562932 (Rat Genome Database)
501893 (Entrez Gene)
Pramef8l3 (Alliance of Genome Resources)
Chr14 p22 XP_003751353 (RefSeq)
Pramef20-ps2 RGD:1562423 (Rat Genome Database)
501902 (Entrez Gene)
Pramef20-ps2 (Alliance of Genome Resources)
Chr14 p22
Pramef20l1 RGD:1561699 (Rat Genome Database)
501890 (Entrez Gene)
Pramef20l1 (Alliance of Genome Resources)
Chr14 p22 XP_063129942 (RefSeq)
Pramel38l1 RGD:2323210 (Rat Genome Database)
100363333 (Entrez Gene)
Pramel38l1 (Alliance of Genome Resources)
Chr14 XP_038948482 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory