Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRAMEF7	HGNC:28415 (HGNC) 441871 (Entrez Gene) PRAMEF7 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12916610-12920751 (+) GRCh38		Q5VXH5 (UniProt | EBI) NM_001012277 (RefSeq)
	PRAMEF8	HGNC:24074 (HGNC) 391002 (Entrez Gene) PRAMEF8 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13281304-13285137 (-) GRCh38		Q5VWM4 (UniProt | EBI) NM_001012276 (RefSeq)
	PRAMEF13	HGNC:13262 (HGNC) 400736 (Entrez Gene) PRAMEF13 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13196188-13201409 (-) GRCh38		Q5VWM6 (UniProt | EBI) NM_001291380 (RefSeq)
mouse	Pramel12	MGI:2140473 (MGI) 242736 (Entrez Gene) Gene Tree Pramel12 (Alliance of Genome Resources)	Chr4 77.65 cM	Chr4:143138996-143147661 (+) GRCm39		ENSMUSG00000046862 (Ensembl Gene Model) ENSMUSP00000058676 (Ensembl) ENSMUST00000059790 (Ensembl)
rat	Pramef8	RGD:1564061 (Rat Genome Database) 502994 (Entrez Gene) Pramef8 (Alliance of Genome Resources)	Chr5 q36			NP_001129254 (RefSeq) NM_001135782 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.