Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Mup4	MGI:97236 (MGI) 17843 (Entrez Gene) Gene Tree Mup4 (Alliance of Genome Resources)	Chr4 32.82 cM	Chr4:59956804-59960667 (-) GRCm39		17843 (NCBI Gene Model) P11590 (UniProt | EBI) NM_008648 (RefSeq)
rat	Mup4	RGD:735211 (Rat Genome Database) 362527 (Entrez Gene) Mup4 (Alliance of Genome Resources)	Chr5 q24			NP_942079 (RefSeq) NM_198784 (RefSeq)
	Mup4-ps6	RGD:41225607 (Rat Genome Database) 120102892 (Entrez Gene) Mup4-ps6 (Alliance of Genome Resources)	Chr5
	Mup4l1	RGD:1566134 (Rat Genome Database) 298109 (Entrez Gene) Mup4l1 (Alliance of Genome Resources)	Chr5 q24			P02761 (UniProt | EBI) NM_203512 (RefSeq)
	Mup4l3	RGD:1593272 (Rat Genome Database) 298111 (Entrez Gene) Mup4l3 (Alliance of Genome Resources)	Chr5 q24			NP_001019419 (RefSeq) NM_001024248 (RefSeq)
	Mup4l4	RGD:708501 (Rat Genome Database) 259244 (Entrez Gene) Mup4l4 (Alliance of Genome Resources)	Chr5 q24			NP_671745 (RefSeq) NM_147212 (RefSeq)
	Mup5	RGD:735107 (Rat Genome Database) 298107 (Entrez Gene) Mup5 (Alliance of Genome Resources)	Chr5 q24			NP_976070 (RefSeq) NM_147213 (RefSeq)
	Mup18	RGD:1583727 (Rat Genome Database) 500473 (Entrez Gene) Mup18 (Alliance of Genome Resources)	Chr5 q24			XP_063117360 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.