Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Or1j16	MGI:3030179 (MGI) 258947 (Entrez Gene) Gene Tree Or1j16 (Alliance of Genome Resources)	Chr2 24.19 cM	Chr2:36530053-36530988 (+) GRCm39		258947 (NCBI Gene Model) NP_667156 (RefSeq) NM_146945 (RefSeq)
rat	Or1j16	RGD:1334217 (Rat Genome Database) 296667 (Entrez Gene) Or1j16 (Alliance of Genome Resources)	Chr3 p11			NP_001000382 (RefSeq) NM_001000382 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.