Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Or5d40	MGI:3031002 (MGI) 258524 (Entrez Gene) Gene Tree Or5d40 (Alliance of Genome Resources)	Chr2 49.98 cM	Chr2:88015223-88016161 (+) GRCm39		258524 (NCBI Gene Model) NP_666742 (RefSeq) NM_146531 (RefSeq)
rat	Or5d40	RGD:1332979 (Rat Genome Database) 295839 (Entrez Gene) Or5d40 (Alliance of Genome Resources)	Chr3 q24			NP_001000337 (RefSeq) NM_001000337 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.