Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RANBP2	HGNC:9848 (HGNC) 5903 (Entrez Gene) 601181 (OMIM) RANBP2 (Alliance of Genome Resources)	Chr2 q13	Chr2:108719482-109842301 (+) GRCh38	brain disease inflammatory myofibroblastic tumor	P49792 (UniProt | EBI) NM_001415872 (RefSeq)
	RGPD1	HGNC:32414 (HGNC) 400966 (Entrez Gene) 612704 (OMIM) RGPD1 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:86913659-87013976 (+) GRCh38		P0DJD0 (UniProt | EBI) NM_001410915 (RefSeq)
	RGPD2	HGNC:32415 (HGNC) 729857 (Entrez Gene) 612705 (OMIM) RGPD2 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:87755960-87989818 (-) GRCh38		P0DJD1 (UniProt | EBI) NM_001393613 (RefSeq)
	RGPD3	HGNC:32416 (HGNC) 653489 (Entrez Gene) 612706 (OMIM) RGPD3 (Alliance of Genome Resources)	Chr2 q12.2	Chr2:106391290-106470935 (-) GRCh38		A6NKT7 (UniProt | EBI) NM_001144013 (RefSeq)
	RGPD4	HGNC:32417 (HGNC) 285190 (Entrez Gene) 612707 (OMIM) RGPD4 (Alliance of Genome Resources)	Chr2 q12.3	Chr2:107826892-107892544 (+) GRCh38		Q7Z3J3 (UniProt | EBI) NM_182588 (RefSeq)
	RGPD5	HGNC:32418 (HGNC) 84220 (Entrez Gene) 612708 (OMIM) RGPD5 (Alliance of Genome Resources)	Chr2 q13	Chr2:109760618-109857705 (+) GRCh38		Q99666 (UniProt | EBI) NM_032260 (RefSeq)
	RGPD6	HGNC:32419 (HGNC) 729540 (Entrez Gene) 612709 (OMIM) RGPD6 (Alliance of Genome Resources)	Chr2 q13			Q99666 (UniProt | EBI) NM_001037866 (RefSeq)
	RGPD8	HGNC:9849 (HGNC) 727851 (Entrez Gene) 602752 (OMIM) RGPD8 (Alliance of Genome Resources)	Chr2 q14.1			O14715 (UniProt | EBI) NM_001164463 (RefSeq)
mouse	Ranbp2	MGI:894323 (MGI) 19386 (Entrez Gene) Gene Tree Ranbp2 (Alliance of Genome Resources)	Chr10 29.34 cM	Chr10:58282674-58329977 (+) GRCm39		19386 (NCBI Gene Model) Q9ERU9 (UniProt | EBI) NM_011240 (RefSeq)
rat	Ranbp2	RGD:1560047 (Rat Genome Database) 294429 (Entrez Gene) Ranbp2 (Alliance of Genome Resources)	Chr20 q11			NP_001178533 (RefSeq) NM_001191604 (RefSeq)
zebrafish	ranbp2	ZDB-GENE-081104-93 (Zebrafish Model Organism Database) 100317326 (Entrez Gene) ranbp2 (Alliance of Genome Resources)	Chr9			XP_021334470 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.