Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HOXC12	HGNC:5124 (HGNC) 3228 (Entrez Gene) 142975 (OMIM) HOXC12 (Alliance of Genome Resources)	Chr12 q13.13	Chr12:53954903-53958956 (+) GRCh38		P31275 (UniProt | EBI) NM_173860 (RefSeq)
mouse	Hoxc12	MGI:96194 (MGI) 15421 (Entrez Gene) Gene Tree Hoxc12 (Alliance of Genome Resources)	Chr15 58.01 cM	Chr15:102845261-102847044 (+) GRCm39		15421 (NCBI Gene Model) Q8K5B8 (UniProt | EBI) NM_010463 (RefSeq)
rat	Hoxc12	RGD:1310539 (Rat Genome Database) 300262 (Entrez Gene) Hoxc12 (Alliance of Genome Resources)	Chr7 q36			NP_001100266 (RefSeq) NM_001106796 (RefSeq)
zebrafish	hoxc12a	ZDB-GENE-000822-6 (Zebrafish Model Organism Database) 562600 (Entrez Gene) hoxc12a (Alliance of Genome Resources)	Chr23			NP_001104229 (RefSeq) NM_001110759 (RefSeq)
	hoxc12b	ZDB-GENE-000329-17 (Zebrafish Model Organism Database) 58062 (Entrez Gene) hoxc12b (Alliance of Genome Resources)	Chr11			Q9YGT0 (UniProt | EBI) NM_131545 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.