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Vertebrate Homology
Source
 Alliance of Genome Resources

Comparative GO Graph (mouse, human, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)		 Associated Human Diseases Sequences
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human OR5K1 HGNC:8349 (HGNC)
26339 (Entrez Gene)
OR5K1 (Alliance of Genome Resources)
 Chr3 q11.2 Chr3:98463201-98472924 (+)
GRCh38 		Q8NHB7 (UniProt | EBI)
NM_001004736 (RefSeq)
OR5K2 HGNC:14774 (HGNC)
402135 (Entrez Gene)
OR5K2 (Alliance of Genome Resources)
 Chr3 q11.2 Chr3:98497681-98498631 (+)
GRCh38 		Q8NHB8 (UniProt | EBI)
NM_001004737 (RefSeq)
mouse Or5k1 MGI:3030007 (MGI)
259002 (Entrez Gene)
Gene Tree
Or5k1 (Alliance of Genome Resources)
 Chr16 34.83 cM Chr16:58617142-58618305 (-)
GRCm39 		259002 (NCBI Gene Model)
NP_667211 (RefSeq)
NM_147000 (RefSeq)
zebrafish or42a1 ZDB-GENE-070806-67 (Zebrafish Model Organism Database)
100151522 (Entrez Gene)
or42a1 (Alliance of Genome Resources)
 Chr10 NP_001122058 (RefSeq)
NM_001128586 (RefSeq)
or42a2 ZDB-GENE-070804-6 (Zebrafish Model Organism Database)
100149914 (Entrez Gene)
or42a2 (Alliance of Genome Resources)
 Chr10 NP_001124279 (RefSeq)
NM_001130807 (RefSeq)
or42a5 ZDB-GENE-070806-69 (Zebrafish Model Organism Database)
100148447 (Entrez Gene)
or42a5 (Alliance of Genome Resources)
 Chr10 NP_001122035 (RefSeq)
NM_001128563 (RefSeq)
or42a6 ZDB-GENE-070804-5 (Zebrafish Model Organism Database)
100149214 (Entrez Gene)
or42a6 (Alliance of Genome Resources)
 Chr10 NP_001122043 (RefSeq)
NM_001128571 (RefSeq)
or42a7 ZDB-GENE-070806-70 (Zebrafish Model Organism Database)
100151312 (Entrez Gene)
or42a7 (Alliance of Genome Resources)
 Chr10 NP_001124288 (RefSeq)
NM_001130816 (RefSeq)
or42a8 ZDB-GENE-070806-68 (Zebrafish Model Organism Database)
100147989 (Entrez Gene)
or42a8 (Alliance of Genome Resources)
 Chr10 NP_001124270 (RefSeq)
NM_001130798 (RefSeq)
or42b1 ZDB-GENE-070806-76 (Zebrafish Model Organism Database)
100150812 (Entrez Gene)
or42b1 (Alliance of Genome Resources)
 Chr10 NP_001121883 (RefSeq)
NM_001128411 (RefSeq)
or42c1 ZDB-GENE-000329-14 (Zebrafish Model Organism Database)
58115 (Entrez Gene)
or42c1 (Alliance of Genome Resources)
 Chr15 NP_571667 (RefSeq)
NM_131592 (RefSeq)
or42c2 ZDB-GENE-000329-10 (Zebrafish Model Organism Database)
58103 (Entrez Gene)
or42c2 (Alliance of Genome Resources)
 Chr15 NP_001349357 (RefSeq)
NM_131581 (RefSeq)
or42c4 ZDB-GENE-000329-15 (Zebrafish Model Organism Database)
58104 (Entrez Gene)
or42c4 (Alliance of Genome Resources)
 Chr15 NP_571657 (RefSeq)
NM_131582 (RefSeq)
or42c5 ZDB-GENE-010308-10 (Zebrafish Model Organism Database)
80362 (Entrez Gene)
or42c5 (Alliance of Genome Resources)
 Chr15 NP_571819 (RefSeq)
NM_131744 (RefSeq)
or42e2 ZDB-GENE-010308-12 (Zebrafish Model Organism Database)
80372 (Entrez Gene)
or42e2 (Alliance of Genome Resources)
 Chr15 NP_694517 (RefSeq)
NM_152985 (RefSeq)
or42e3 ZDB-GENE-010308-19 (Zebrafish Model Organism Database)
791954 (Entrez Gene)
or42e3 (Alliance of Genome Resources)
 Chr15 NP_001122244 (RefSeq)
NM_001128772 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory