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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HLA-DOB HGNC:4937 (HGNC)
3112 (Entrez Gene)
600629 (OMIM)
HLA-DOB (Alliance of Genome Resources)
Chr6 p21.32 Chr6:32812763-32820466 (-)
GRCh38
P13765 (UniProt | EBI)
NM_002120 (RefSeq)
mouse H2-Ob MGI:95925 (MGI)
15002 (Entrez Gene)
Gene Tree
H2-Ob (Alliance of Genome Resources)
Chr17 17.98 cM Chr17:34457879-34464882 (+)
GRCm39
15002 (NCBI Gene Model)
NP_034519 (RefSeq)
NM_010389 (RefSeq)
rat RT1-DOb RGD:1595814 (Rat Genome Database)
365542 (Entrez Gene)
RT1-DOb (Alliance of Genome Resources)
Chr20 p12 NP_001008846 (RefSeq)
NM_001412194 (RefSeq)
zebrafish mhc2bl ZDB-GENE-030616-99 (Zebrafish Model Organism Database)
368703 (Entrez Gene)
mhc2bl (Alliance of Genome Resources)
Chr8 XP_005167291 (RefSeq)
mhc2d4b ZDB-GENE-030131-4747 (Zebrafish Model Organism Database)
326022 (Entrez Gene)
mhc2d4b (Alliance of Genome Resources)
Chr4 XP_002661942 (RefSeq)
mhc2d8.37b2 ZDB-GENE-091204-413 (Zebrafish Model Organism Database)
100332219 (Entrez Gene)
mhc2d8.37b2 (Alliance of Genome Resources)
Chr8 XP_009302413 (RefSeq)
mhc2d8.45b1 ZDB-GENE-030616-396 (Zebrafish Model Organism Database)
368846 (Entrez Gene)
mhc2d8.45b1 (Alliance of Genome Resources)
Chr8 NP_001071221 (RefSeq)
NM_001001595 (RefSeq)
mhc2dab ZDB-GENE-980526-200 (Zebrafish Model Organism Database)
30762 (Entrez Gene)
mhc2dab (Alliance of Genome Resources)
Chr8 NP_571551 (RefSeq)
NM_131476 (RefSeq)
mhc2dbb ZDB-GENE-010112-2 (Zebrafish Model Organism Database)
767810 (Entrez Gene)
mhc2dbb (Alliance of Genome Resources)
Chr18 NP_001070245 (RefSeq)
NM_001076777 (RefSeq)
mhc2dgb ZDB-GENE-030616-319 (Zebrafish Model Organism Database)
368615 (Entrez Gene)
mhc2dgb (Alliance of Genome Resources)
Chr8 NP_001007207 (RefSeq)
NM_001007206 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory