Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VSX2	HGNC:1975 (HGNC) 338917 (Entrez Gene) 142993 (OMIM) VSX2 (Alliance of Genome Resources)	Chr14 q24.3		blindness isolated microphthalmia 2	P58304 (UniProt | EBI) NM_182894 (RefSeq)
mouse	Vsx2	MGI:88401 (MGI) 12677 (Entrez Gene) Gene Tree Vsx2 (Alliance of Genome Resources)	Chr12 39.28 cM	Chr12:84616602-84642231 (+) GRCm39		12677 (NCBI Gene Model) Q61412 (UniProt | EBI) NM_001301427 (RefSeq)
rat	Vsx2	RGD:621215 (Rat Genome Database) 171360 (Entrez Gene) Vsx2 (Alliance of Genome Resources)	Chr6 q31			NP_001162599 (RefSeq) NM_001169128 (RefSeq)
zebrafish	vsx2	ZDB-GENE-001222-1 (Zebrafish Model Organism Database) 796163 (Entrez Gene) vsx2 (Alliance of Genome Resources)	Chr17			O42477 (UniProt | EBI) NM_131462 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.