CDH1 Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	CDH1	HGNC:1748 (HGNC) 999 (Entrez Gene) 192090 (OMIM) CDH1 (Alliance of Genome Resources)	Chr16 q22.1	Chr16:68737292-68835537 (+) GRCh38	acute myeloid leukemia asthma blepharocheilodontic syndrome 1 breast cancer cervix uteri carcinoma in situ cleft lip endometrial cancer hepatocellular carcinoma hereditary diffuse gastric cancer invasive lobular carcinoma mucoepidermoid carcinoma ovarian cancer prostate cancer renal cell carcinoma	P12830 (UniProt \| EBI) NM_004360 (RefSeq)
mouse	Cdh1	MGI:88354 (MGI) 12550 (Entrez Gene) Gene Tree Cdh1 (Alliance of Genome Resources)	Chr8 53.18 cM	Chr8:107329983-107396878 (+) GRCm39		ENSMUSG00000000303 (Ensembl Gene Model) ENSMUSP00000000312 (Ensembl) ENSMUST00000000312 (Ensembl)
rat	Cdh1	RGD:69279 (Rat Genome Database) 83502 (Entrez Gene) Cdh1 (Alliance of Genome Resources)	Chr19 q12			Q9R0T4 (UniProt \| EBI) NM_031334 (RefSeq)
zebrafish	cdh1	ZDB-GENE-010606-1 (Zebrafish Model Organism Database) 114424 (Entrez Gene) cdh1 (Alliance of Genome Resources)	Chr7			NP_571895 (RefSeq) NM_131820 (RefSeq)
	cdh28	ZDB-GENE-081104-9 (Zebrafish Model Organism Database) 108179109 (Entrez Gene) cdh28 (Alliance of Genome Resources)	Chr7			XP_017212586 (RefSeq)
	cdh31	ZDB-GENE-110407-4 (Zebrafish Model Organism Database) 567602 (Entrez Gene) cdh31 (Alliance of Genome Resources)	Chr7			XP_017212590 (RefSeq)
	si:dkey-30c15.12	ZDB-GENE-060503-920 (Zebrafish Model Organism Database) 793186 (Entrez Gene) si:dkey-30c15.12 (Alliance of Genome Resources)	Chr18			NP_001352785 (RefSeq) NM_001365856 (RefSeq)