Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VIM	HGNC:12692 (HGNC) 7431 (Entrez Gene) 193060 (OMIM) VIM (Alliance of Genome Resources)	Chr10 p13	Chr10:17228241-17237593 (+) GRCh38	atherosclerosis Behcet's disease cataract 30 rheumatoid arthritis Sjogren's syndrome systemic lupus erythematosus	P08670 (UniProt | EBI) NM_003380 (RefSeq)
mouse	Vim	MGI:98932 (MGI) 22352 (Entrez Gene) Gene Tree Vim (Alliance of Genome Resources)	Chr2 10.04 cM	Chr2:13579122-13587637 (+) GRCm39	cataract 30	22352 (NCBI Gene Model) P20152 (UniProt | EBI) NM_011701 (RefSeq)
rat	Vim	RGD:621646 (Rat Genome Database) 81818 (Entrez Gene) Vim (Alliance of Genome Resources)	Chr17 q12.3			P31000 (UniProt | EBI) NM_031140 (RefSeq)
zebrafish	vim	ZDB-GENE-011212-3 (Zebrafish Model Organism Database) 140599 (Entrez Gene) vim (Alliance of Genome Resources)	Chr24			NP_571947 (RefSeq) NM_131872 (RefSeq)
	viml	ZDB-GENE-040426-1743 (Zebrafish Model Organism Database) 393746 (Entrez Gene) viml (Alliance of Genome Resources)	Chr2			NP_957067 (RefSeq) NM_200773 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.