PCDHGC5 Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	PCDHGC5	HGNC:8718 (HGNC) 56097 (Entrez Gene) 606306 (OMIM) PCDHGC5 (Alliance of Genome Resources)	Chr5 q31.3	Chr5:141489081-141512975 (+) GRCh38		Q9Y5F6 (UniProt \| EBI) NM_018929 (RefSeq)
mouse	Pcdhgc5	MGI:1935205 (MGI) 93708 (Entrez Gene) Gene Tree Pcdhgc5 (Alliance of Genome Resources)	Chr18 19.69 cM	Chr18:37952599-37974926 (+) GRCm39		93708 (NCBI Gene Model) NP_291061 (RefSeq) NM_033583 (RefSeq)
zebrafish	pcdh1g9	ZDB-GENE-050609-5 (Zebrafish Model Organism Database) 553997 (Entrez Gene) pcdh1g9 (Alliance of Genome Resources)	Chr10			NP_001019280 (RefSeq) NM_001024109 (RefSeq)
	pcdh1g22	ZDB-GENE-030131-2695 (Zebrafish Model Organism Database) 108191476 (Entrez Gene) pcdh1g22 (Alliance of Genome Resources)	Chr10			NP_997823 (RefSeq) NM_212658 (RefSeq)
	pcdh1g26	ZDB-GENE-050609-21 (Zebrafish Model Organism Database) 554012 (Entrez Gene) pcdh1g26 (Alliance of Genome Resources)	Chr10			NP_001019295 (RefSeq) NM_001024124 (RefSeq)
	pcdh1g29	ZDB-GENE-050609-22 (Zebrafish Model Organism Database) 554013 (Entrez Gene) pcdh1g29 (Alliance of Genome Resources)	Chr10			NP_001019296 (RefSeq) NM_001024125 (RefSeq)
	pcdh1g30	ZDB-GENE-050609-23 (Zebrafish Model Organism Database) 554014 (Entrez Gene) pcdh1g30 (Alliance of Genome Resources)	Chr10			NP_001019297 (RefSeq) NM_001024126 (RefSeq)
	pcdh1g31	ZDB-GENE-050609-24 (Zebrafish Model Organism Database) 554015 (Entrez Gene) pcdh1g31 (Alliance of Genome Resources)	Chr10			NP_001019298 (RefSeq) NM_001024127 (RefSeq)
	pcdh1g33	ZDB-GENE-071004-76 (Zebrafish Model Organism Database) 100003438 (Entrez Gene) pcdh1g33 (Alliance of Genome Resources)	Chr10			NP_001103206 (RefSeq) NM_001109736 (RefSeq)
	pcdh1gc5	ZDB-GENE-041118-16 (Zebrafish Model Organism Database) 503571 (Entrez Gene) pcdh1gc5 (Alliance of Genome Resources)	Chr10			NP_001012674 (RefSeq) NM_001012656 (RefSeq)
	pcdh1gc6	ZDB-GENE-041118-17 (Zebrafish Model Organism Database) 503572 (Entrez Gene) pcdh1gc6 (Alliance of Genome Resources)	Chr10			NP_001012675 (RefSeq) NM_001012657 (RefSeq)