Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SCAMP5	HGNC:30386 (HGNC) 192683 (Entrez Gene) 613766 (OMIM) SCAMP5 (Alliance of Genome Resources)	Chr15 q24.2	Chr15:74957219-75021495 (+) GRCh38		Q8TAC9 (UniProt | EBI) NM_001178111 (RefSeq)
mouse	Scamp5	MGI:1928948 (MGI) 56807 (Entrez Gene) Gene Tree Scamp5 (Alliance of Genome Resources)	Chr9 31.05 cM	Chr9:57348610-57375343 (-) GRCm39	epilepsy	56807 (NCBI Gene Model) Q9JKD3 (UniProt | EBI) NM_001301634 (RefSeq)
rat	Scamp5	RGD:68356 (Rat Genome Database) 65171 (Entrez Gene) Scamp5 (Alliance of Genome Resources)	Chr8 q24			Q9JKE3 (UniProt | EBI) NM_031726 (RefSeq)
zebrafish	scamp5a	ZDB-GENE-030131-3188 (Zebrafish Model Organism Database) 324467 (Entrez Gene) scamp5a (Alliance of Genome Resources)	Chr25			Q6P0C7 (UniProt | EBI) NM_205547 (RefSeq)
	scamp5b	ZDB-GENE-120215-76 (Zebrafish Model Organism Database) 100004357 (Entrez Gene) scamp5b (Alliance of Genome Resources)	Chr18			XP_001343683 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.