Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STK40	HGNC:21373 (HGNC) 83931 (Entrez Gene) 609437 (OMIM) STK40 (Alliance of Genome Resources)	Chr1 p34.3	Chr1:36339624-36385924 (-) GRCh38		Q8N2I9 (UniProt | EBI) NM_001282546 (RefSeq)
mouse	Stk40	MGI:1921428 (MGI) 74178 (Entrez Gene) Gene Tree Stk40 (Alliance of Genome Resources)	Chr4 59.89 cM	Chr4:125997750-126034822 (+) GRCm39		ENSMUSG00000042608 (Ensembl Gene Model) ENSMUSP00000111990 (Ensembl) ENSMUST00000116286 (Ensembl)
rat	Stk40	RGD:727884 (Rat Genome Database) 360230 (Entrez Gene) Stk40 (Alliance of Genome Resources)	Chr5 q36			Q7TNL4 (UniProt | EBI) NM_183056 (RefSeq)
zebrafish	stk40	ZDB-GENE-030131-4831 (Zebrafish Model Organism Database) 564859 (Entrez Gene) stk40 (Alliance of Genome Resources)	Chr16			XP_693275 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.