Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PLSCR5	HGNC:19952 (HGNC) 389158 (Entrez Gene) PLSCR5 (Alliance of Genome Resources)	Chr3 q24	Chr3:146576555-146605346 (-) GRCh38		A0PG75 (UniProt | EBI) NM_001085420 (RefSeq)
mouse	Plscr5	MGI:3779462 (MGI) 100504689 (Entrez Gene) Gene Tree Plscr5 (Alliance of Genome Resources)	Chr9 48.33 cM	Chr9:92074989-92091825 (+) GRCm39		ENSMUSG00000095654 (Ensembl Gene Model) ENSMUSP00000136181 (Ensembl) ENSMUST00000179751 (Ensembl)
rat	Plscr5	RGD:1564500 (Rat Genome Database) 501036 (Entrez Gene) Plscr5 (Alliance of Genome Resources)	Chr8 q31			NP_001178928 (RefSeq) NM_001191999 (RefSeq)
zebrafish	si:ch73-206p6.1	ZDB-GENE-030131-5048 (Zebrafish Model Organism Database) 571998 (Entrez Gene) si:ch73-206p6.1 (Alliance of Genome Resources)	Chr24			XP_002666647 (RefSeq)
	si:ch211-71m22.1	ZDB-GENE-070705-193 (Zebrafish Model Organism Database) 100149582 (Entrez Gene) si:ch211-71m22.1 (Alliance of Genome Resources)	Chr2			NP_001121867 (RefSeq) NM_001128395 (RefSeq)
	si:ch211-71m22.5	ZDB-GENE-130531-65 (Zebrafish Model Organism Database) 564785 (Entrez Gene) si:ch211-71m22.5 (Alliance of Genome Resources)	Chr2			XP_693207 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.