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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human H1-6 HGNC:4720 (HGNC)
3010 (Entrez Gene)
142712 (OMIM)
H1-6 (Alliance of Genome Resources)
Chr6 p22.2 Chr6:26107412-26108135 (-)
GRCh38
P22492 (UniProt | EBI)
NM_005323 (RefSeq)
mouse H1f6 MGI:1888530 (MGI)
107970 (Entrez Gene)
Gene Tree
H1f6 (Alliance of Genome Resources)
Chr13 9.88 cM Chr13:23879794-23880528 (+)
GRCm39
107970 (NCBI Gene Model)
Q07133 (UniProt | EBI)
NM_010377 (RefSeq)
rat H1f6 RGD:2778 (Rat Genome Database)
24438 (Entrez Gene)
H1f6 (Alliance of Genome Resources)
Chr17 p11 P06349 (UniProt | EBI)
NM_012579 (RefSeq)
zebrafish histh1l1 ZDB-GENE-050417-145 (Zebrafish Model Organism Database)
550353 (Entrez Gene)
histh1l1 (Alliance of Genome Resources)
Chr5 NP_001017660 (RefSeq)
NM_001017660 (RefSeq)
histh1l2 ZDB-GENE-160113-41 (Zebrafish Model Organism Database)
103911343 (Entrez Gene)
histh1l2 (Alliance of Genome Resources)
Chr7 XP_009301186 (RefSeq)
histh1l3 ZDB-GENE-131121-2 (Zebrafish Model Organism Database)
100334868 (Entrez Gene)
histh1l3 (Alliance of Genome Resources)
Chr25 XP_002666950 (RefSeq)
si:ch73-368j24.11 ZDB-GENE-160113-46 (Zebrafish Model Organism Database)
562307 (Entrez Gene)
si:ch73-368j24.11 (Alliance of Genome Resources)
Chr7 XP_005168858 (RefSeq)
si:ch211-103n10.5 ZDB-GENE-030131-5155 (Zebrafish Model Organism Database)
559526 (Entrez Gene)
si:ch211-103n10.5 (Alliance of Genome Resources)
Chr8 NP_001373259 (RefSeq)
NM_001386330 (RefSeq)
si:ch211-113a14.18 ZDB-GENE-121214-116 (Zebrafish Model Organism Database)
792275 (Entrez Gene)
si:ch211-113a14.18 (Alliance of Genome Resources)
Chr25 XP_001331207 (RefSeq)
si:ch211-113a14.24 ZDB-GENE-121214-122 (Zebrafish Model Organism Database)
573073 (Entrez Gene)
si:ch211-113a14.24 (Alliance of Genome Resources)
Chr25 XP_689758 (RefSeq)
si:dkey-23a13.17 ZDB-GENE-160113-52 (Zebrafish Model Organism Database)
571135 (Entrez Gene)
si:dkey-23a13.17 (Alliance of Genome Resources)
Chr7 NP_001373655 (RefSeq)
NM_001386726 (RefSeq)
si:dkey-108k21.10 ZDB-GENE-131127-26 (Zebrafish Model Organism Database)
100333275 (Entrez Gene)
si:dkey-108k21.10 (Alliance of Genome Resources)
Chr25 XP_002666973 (RefSeq)
si:dkey-108k21.21 ZDB-GENE-131127-5 (Zebrafish Model Organism Database)
100332815 (Entrez Gene)
si:dkey-108k21.21 (Alliance of Genome Resources)
Chr25
si:dkey-261m9.12 ZDB-GENE-131126-58 (Zebrafish Model Organism Database)
560910 (Entrez Gene)
si:dkey-261m9.12 (Alliance of Genome Resources)
Chr25 XP_017209709 (RefSeq)
zgc:110216 ZDB-GENE-050320-42 (Zebrafish Model Organism Database)
541350 (Entrez Gene)
zgc:110216 (Alliance of Genome Resources)
Chr25 NP_001013495 (RefSeq)
NM_001013477 (RefSeq)
zgc:110425 ZDB-GENE-050522-103 (Zebrafish Model Organism Database)
553782 (Entrez Gene)
zgc:110425 (Alliance of Genome Resources)
Chr7 NP_001018582 (RefSeq)
NM_001020746 (RefSeq)
zgc:153405 ZDB-GENE-060825-170 (Zebrafish Model Organism Database)
751661 (Entrez Gene)
zgc:153405 (Alliance of Genome Resources)
Chr25 NP_001038843 (RefSeq)
NM_001045378 (RefSeq)
zgc:163061 ZDB-GENE-070410-132 (Zebrafish Model Organism Database)
100037379 (Entrez Gene)
zgc:163061 (Alliance of Genome Resources)
Chr7 NP_001083000 (RefSeq)
NM_001089531 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory