Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PAPLN	HGNC:19262 (HGNC) 89932 (Entrez Gene) 617785 (OMIM) PAPLN (Alliance of Genome Resources)	Chr14 q24.2	Chr14:73235805-73274640 (+) GRCh38		O95428 (UniProt | EBI) NM_001365907 (RefSeq)
mouse	Papln	MGI:2386139 (MGI) 170721 (Entrez Gene) Gene Tree Papln (Alliance of Genome Resources)	Chr12 38.87 cM	Chr12:83810408-83839156 (+) GRCm39		ENSMUSG00000021223 (Ensembl Gene Model) ENSMUSP00000113806 (Ensembl) ENSMUST00000121733 (Ensembl)
rat	Papln	RGD:1311176 (Rat Genome Database) 314297 (Entrez Gene) Papln (Alliance of Genome Resources)	Chr6 q31			XP_038969234 (RefSeq) NM_001108039 (RefSeq)
zebrafish	paplna	ZDB-GENE-070815-4 (Zebrafish Model Organism Database) 562930 (Entrez Gene) paplna (Alliance of Genome Resources)	Chr17			XP_068070753 (RefSeq)
	paplnb	ZDB-GENE-030131-6023 (Zebrafish Model Organism Database) 553586 (Entrez Gene) paplnb (Alliance of Genome Resources)	Chr20			NP_001018400 (RefSeq) NM_001020564 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.