Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	KDM4A	HGNC:22978 (HGNC) 9682 (Entrez Gene) 609764 (OMIM) KDM4A (Alliance of Genome Resources)	Chr1 p34.2-p34.1	Chr1:43650149-43705518 (+) GRCh38		O75164 (UniProt | EBI) NM_014663 (RefSeq)
mouse	Kdm4a	MGI:2446210 (MGI) 230674 (Entrez Gene) Gene Tree Kdm4a (Alliance of Genome Resources)	Chr4 54.31 cM	Chr4:117994154-118037216 (-) GRCm39		230674 (NCBI Gene Model) Q8BW72 (UniProt | EBI) NR_189679 (RefSeq)
rat	Kdm4a	RGD:1306378 (Rat Genome Database) 313539 (Entrez Gene) Kdm4a (Alliance of Genome Resources)	Chr5 q36			NP_001101436 (RefSeq) NM_001107966 (RefSeq)
zebrafish	kdm4aa	ZDB-GENE-110609-4 (Zebrafish Model Organism Database) 100003413 (Entrez Gene) kdm4aa (Alliance of Genome Resources)	Chr6			XP_005165745 (RefSeq)
	kdm4ab	ZDB-GENE-030131-6279 (Zebrafish Model Organism Database) 334347 (Entrez Gene) kdm4ab (Alliance of Genome Resources)	Chr2			XP_001339664 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.