Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PSMC1	HGNC:9547 (HGNC) 5700 (Entrez Gene) 602706 (OMIM) PSMC1 (Alliance of Genome Resources)	Chr14 q32.11	Chr14:90256527-90275429 (+) GRCh38	neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss	P62191 (UniProt | EBI) NM_002802 (RefSeq)
mouse	Psmc1	MGI:106054 (MGI) 19179 (Entrez Gene) Gene Tree Psmc1 (Alliance of Genome Resources)	Chr12 50.43 cM	Chr12:100076461-100089623 (+) GRCm39		19179 (NCBI Gene Model) P62192 (UniProt | EBI) NM_008947 (RefSeq)
rat	Psmc1	RGD:621097 (Rat Genome Database) 117263 (Entrez Gene) Psmc1 (Alliance of Genome Resources)	Chr6 q32			P62193 (UniProt | EBI) NM_057123 (RefSeq)
zebrafish	psmc1a	ZDB-GENE-030131-8730 (Zebrafish Model Organism Database) 336786 (Entrez Gene) psmc1a (Alliance of Genome Resources)	Chr17			NP_956327 (RefSeq) NM_200033 (RefSeq)
	psmc1b	ZDB-GENE-040625-69 (Zebrafish Model Organism Database) 415181 (Entrez Gene) psmc1b (Alliance of Genome Resources)	Chr20			NP_001002091 (RefSeq) NM_001002091 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.