Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SYNJ1	HGNC:11503 (HGNC) 8867 (Entrez Gene) 604297 (OMIM) SYNJ1 (Alliance of Genome Resources)	Chr21 q22.11	Chr21:32628759-32728394 (-) GRCh38	developmental and epileptic encephalopathy 53 Parkinson's disease Parkinson's disease 20	O43426 (UniProt | EBI) NM_001160302 (RefSeq)
mouse	Synj1	MGI:1354961 (MGI) 104015 (Entrez Gene) Gene Tree Synj1 (Alliance of Genome Resources)	Chr16 52.18 cM	Chr16:90732980-90808196 (-) GRCm39		ENSMUSG00000022973 (Ensembl Gene Model) ENSMUSP00000113308 (Ensembl) ENSMUST00000121759 (Ensembl)
rat	Synj1	RGD:69434 (Rat Genome Database) 85238 (Entrez Gene) Synj1 (Alliance of Genome Resources)	Chr11 q11			Q62910 (UniProt | EBI) NM_001415050 (RefSeq)
zebrafish	synj1	ZDB-GENE-030131-9180 (Zebrafish Model Organism Database) 337236 (Entrez Gene) synj1 (Alliance of Genome Resources)	Chr10			NP_001007031 (RefSeq) NM_001007030 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.