Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	ATP6V1A	HGNC:851 (HGNC) 523 (Entrez Gene) 607027 (OMIM) ATP6V1A (Alliance of Genome Resources)	Chr3 q13.31	Chr3:113746770-113812056 (+) GRCh38	autosomal recessive cutis laxa type IID developmental and epileptic encephalopathy 93	P38606 (UniProt | EBI) NM_001690 (RefSeq)
mouse	Atp6v1a	MGI:1201780 (MGI) 11964 (Entrez Gene) Gene Tree Atp6v1a (Alliance of Genome Resources)	Chr16 28.44 cM	Chr16:43905765-43960055 (-) GRCm39		11964 (NCBI Gene Model) P50516 (UniProt | EBI) NM_001358204 (RefSeq)
rat	Atp6v1a	RGD:1596464 (Rat Genome Database) 685232 (Entrez Gene) Atp6v1a (Alliance of Genome Resources)	Chr11 q21			NP_001101788 (RefSeq) NM_001108318 (RefSeq)
zebrafish	atp6v1aa	ZDB-GENE-040426-1143 (Zebrafish Model Organism Database) 394110 (Entrez Gene) atp6v1aa (Alliance of Genome Resources)	Chr5			NP_957429 (RefSeq) NM_201135 (RefSeq)
	atp6v1ab	ZDB-GENE-030131-9529 (Zebrafish Model Organism Database) 337583 (Entrez Gene) atp6v1ab (Alliance of Genome Resources)	Chr24			XP_002666686 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.