Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTPN1	HGNC:9642 (HGNC) 5770 (Entrez Gene) 176885 (OMIM) PTPN1 (Alliance of Genome Resources)	Chr20 q13.13	Chr20:50510321-50585241 (+) GRCh38	coronary artery disease essential hypertension type 2 diabetes mellitus	P18031 (UniProt | EBI) NM_001278618 (RefSeq)
mouse	Ptpn1	MGI:97805 (MGI) 19246 (Entrez Gene) Gene Tree Ptpn1 (Alliance of Genome Resources)	Chr2 87.99 cM	Chr2:167773977-167821305 (+) GRCm39		ENSMUSG00000027540 (Ensembl Gene Model) ENSMUSP00000029053 (Ensembl) ENSMUST00000029053 (Ensembl)
rat	Ptpn1	RGD:61965 (Rat Genome Database) 24697 (Entrez Gene) Ptpn1 (Alliance of Genome Resources)	Chr3 q42			P20417 (UniProt | EBI) NM_012637 (RefSeq)
zebrafish	ptpn1	ZDB-GENE-980605-23 (Zebrafish Model Organism Database) 30081 (Entrez Gene) ptpn1 (Alliance of Genome Resources)	Chr8			NP_001300615 (RefSeq) NM_001313685 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.