Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CNTN1	HGNC:2171 (HGNC) 1272 (Entrez Gene) 600016 (OMIM) CNTN1 (Alliance of Genome Resources)	Chr12 q12	Chr12:40692439-41072415 (+) GRCh38	Compton-North congenital myopathy	Q12860 (UniProt | EBI) NM_001843 (RefSeq)
mouse	Cntn1	MGI:105980 (MGI) 12805 (Entrez Gene) Gene Tree Cntn1 (Alliance of Genome Resources)	Chr15 46.39 cM	Chr15:91949034-92239834 (+) GRCm39	Compton-North congenital myopathy	12805 (NCBI Gene Model) P12960 (UniProt | EBI) NM_007727 (RefSeq)
rat	Cntn1	RGD:621300 (Rat Genome Database) 117258 (Entrez Gene) Cntn1 (Alliance of Genome Resources)	Chr7 q35			Q63198 (UniProt | EBI) NM_057118 (RefSeq)
zebrafish	cntn1a	ZDB-GENE-030427-1 (Zebrafish Model Organism Database) 353150 (Entrez Gene) cntn1a (Alliance of Genome Resources)	Chr25			Q8AXZ4 (UniProt | EBI) NM_180969 (RefSeq)
	cntn1b	ZDB-GENE-041210-236 (Zebrafish Model Organism Database) 541474 (Entrez Gene) cntn1b (Alliance of Genome Resources)	Chr4			NP_001014814 (RefSeq) NM_001014814 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.