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Vertebrate Homology
Source
 Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)		 Associated Human Diseases Sequences
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human SLC6A12 HGNC:11045 (HGNC)
6539 (Entrez Gene)
603080 (OMIM)
SLC6A12 (Alliance of Genome Resources)
 Chr12 p13.33 Chr12:183848-214570 (-)
GRCh38 		P48065 (UniProt | EBI)
NM_001206931 (RefSeq)
mouse Slc6a12 MGI:95628 (MGI)
14411 (Entrez Gene)
Gene Tree
Slc6a12 (Alliance of Genome Resources)
 Chr6 57.25 cM Chr6:121320035-121342734 (+)
GRCm39 		ENSMUSG00000030109 (Ensembl Gene Model)
ENSMUSP00000032200 (Ensembl)
ENSMUST00000032200 (Ensembl)
rat Slc6a12 RGD:620255 (Rat Genome Database)
50676 (Entrez Gene)
Slc6a12 (Alliance of Genome Resources)
 Chr4 q42 P48056 (UniProt | EBI)
NM_017335 (RefSeq)
zebrafish si:ch211-132b12.1 ZDB-GENE-050420-315 (Zebrafish Model Organism Database)
100034467 (Entrez Gene)
si:ch211-132b12.1 (Alliance of Genome Resources)
 Chr18 NP_001076533 (RefSeq)
NM_001083064 (RefSeq)
si:ch211-132b12.2 ZDB-GENE-050420-178 (Zebrafish Model Organism Database)
571877 (Entrez Gene)
si:ch211-132b12.2 (Alliance of Genome Resources)
 Chr18 NP_001038688 (RefSeq)
NM_001045223 (RefSeq)
si:ch211-132b12.3 ZDB-GENE-050419-161 (Zebrafish Model Organism Database)
100002232 (Entrez Gene)
si:ch211-132b12.3 (Alliance of Genome Resources)
 Chr18 NP_001076419 (RefSeq)
NM_001082950 (RefSeq)
si:ch211-132b12.6 ZDB-GENE-050420-179 (Zebrafish Model Organism Database)
564583 (Entrez Gene)
si:ch211-132b12.6 (Alliance of Genome Resources)
 Chr18 NP_001038523 (RefSeq)
NM_001045058 (RefSeq)
slc6a11a ZDB-GENE-030131-3729 (Zebrafish Model Organism Database)
558960 (Entrez Gene)
slc6a11a (Alliance of Genome Resources)
 Chr6 NP_001091857 (RefSeq)
NM_001098387 (RefSeq)
slc6a22.1 ZDB-GENE-030616-629 (Zebrafish Model Organism Database)
368923 (Entrez Gene)
slc6a22.1 (Alliance of Genome Resources)
 Chr6 NP_001004533 (RefSeq)
NM_001004533 (RefSeq)
slc6a22.2 ZDB-GENE-030616-628 (Zebrafish Model Organism Database)
561024 (Entrez Gene)
slc6a22.2 (Alliance of Genome Resources)
 Chr6 NP_001116233 (RefSeq)
NM_001122761 (RefSeq)
zgc:158427 ZDB-GENE-061215-110 (Zebrafish Model Organism Database)
790932 (Entrez Gene)
zgc:158427 (Alliance of Genome Resources)
 Chr18 NP_001073546 (RefSeq)
NM_001080077 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory