Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CSH1	HGNC:2440 (HGNC) 1442 (Entrez Gene) 150200 (OMIM) CSH1 (Alliance of Genome Resources)	Chr17 q23.3	Chr17:63894909-63896661 (-) GRCh38		P0DML2 (UniProt | EBI) NM_022641 (RefSeq)
	CSH2	HGNC:2441 (HGNC) 1443 (Entrez Gene) 118820 (OMIM) CSH2 (Alliance of Genome Resources)	Chr17 q23.3	Chr17:63872012-63873766 (-) GRCh38		P0DML3 (UniProt | EBI) NM_020991 (RefSeq)
	CSHL1	HGNC:2442 (HGNC) 1444 (Entrez Gene) 603515 (OMIM) CSHL1 (Alliance of Genome Resources)	Chr17 q23.3	Chr17:63909597-63911341 (-) GRCh38		Q14406 (UniProt | EBI) NM_001321067 (RefSeq)
	GH1	HGNC:4261 (HGNC) 2688 (Entrez Gene) 139250 (OMIM) GH1 (Alliance of Genome Resources)	Chr17 q23.3	Chr17:63917200-63918839 (-) GRCh38	acute lymphoblastic leukemia anemia autoimmune polyendocrine syndrome type 1 beta thalassemia diabetic retinopathy Diamond-Blackfan anemia isolated growth hormone deficiency isolated growth hormone deficiency type IA isolated growth hormone deficiency type IB isolated growth hormone deficiency type II myocardial infarction progeria type 1 diabetes mellitus	P01241 (UniProt | EBI) NM_022562 (RefSeq)
	GH2	HGNC:4262 (HGNC) 2689 (Entrez Gene) 139240 (OMIM) GH2 (Alliance of Genome Resources)	Chr17 q23.3	Chr17:63880215-63881944 (-) GRCh38		P01242 (UniProt | EBI) NM_022557 (RefSeq)
mouse	Gh	MGI:95707 (MGI) 14599 (Entrez Gene) Gene Tree Gh (Alliance of Genome Resources)	Chr11 68.89 cM	Chr11:106191097-106192691 (-) GRCm39	isolated growth hormone deficiency type II	ENSMUSG00000020713 (Ensembl Gene Model) ENSMUSP00000099360 (Ensembl) ENSMUST00000103071 (Ensembl)
rat	Gh1	RGD:2686 (Rat Genome Database) 24391 (Entrez Gene) Gh1 (Alliance of Genome Resources)	Chr10 q32.1			P01244 (UniProt | EBI) NM_001034848 (RefSeq)
zebrafish	gh1	ZDB-GENE-030725-2 (Zebrafish Model Organism Database) 407639 (Entrez Gene) gh1 (Alliance of Genome Resources)	Chr3			NP_001018328 (RefSeq) NM_001020492 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.