Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PIP4K2C	HGNC:23786 (HGNC) 79837 (Entrez Gene) 617104 (OMIM) PIP4K2C (Alliance of Genome Resources)	Chr12 q13.3	Chr12:57591174-57603418 (+) GRCh38		Q8TBX8 (UniProt | EBI) NM_024779 (RefSeq)
mouse	Pip4k2c	MGI:2152214 (MGI) 117150 (Entrez Gene) Gene Tree Pip4k2c (Alliance of Genome Resources)	Chr10 74.5 cM	Chr10:127032936-127047454 (-) GRCm39		ENSMUSG00000025417 (Ensembl Gene Model) ENSMUSP00000013970 (Ensembl) ENSMUST00000013970 (Ensembl)
rat	Pip4k2c	RGD:621711 (Rat Genome Database) 140607 (Entrez Gene) Pip4k2c (Alliance of Genome Resources)	Chr7 q22			O88370 (UniProt | EBI) NM_080480 (RefSeq)
zebrafish	pip4k2ca	ZDB-GENE-030828-9 (Zebrafish Model Organism Database) 373124 (Entrez Gene) pip4k2ca (Alliance of Genome Resources)	Chr23			Q6IQE1 (UniProt | EBI) NM_200101 (RefSeq)
	pip4k2cb	ZDB-GENE-141212-236 (Zebrafish Model Organism Database) 100535634 (Entrez Gene) pip4k2cb (Alliance of Genome Resources)	Chr11			XP_003199456 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.