Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRPV1	HGNC:12716 (HGNC) 7442 (Entrez Gene) 602076 (OMIM) TRPV1 (Alliance of Genome Resources)	Chr17 p13.2	Chr17:3565444-3609411 (-) GRCh38	migraine	Q8NER1 (UniProt | EBI) NM_080705 (RefSeq)
mouse	Trpv1	MGI:1341787 (MGI) 193034 (Entrez Gene) Gene Tree Trpv1 (Alliance of Genome Resources)	Chr11 45.25 cM	Chr11:73125118-73152068 (+) GRCm39		ENSMUSG00000005952 (Ensembl Gene Model) ENSMUSP00000099585 (Ensembl) ENSMUST00000102526 (Ensembl)
rat	Trpv1	RGD:628841 (Rat Genome Database) 83810 (Entrez Gene) Trpv1 (Alliance of Genome Resources)	Chr10 q24			O35433 (UniProt | EBI) NM_031982 (RefSeq)
zebrafish	trpv1	ZDB-GENE-030912-8 (Zebrafish Model Organism Database) 561195 (Entrez Gene) trpv1 (Alliance of Genome Resources)	Chr5			NP_001119871 (RefSeq) NM_001126399 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.