HLA-H Vertebrate HGNC

About Help FAQ

Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	HLA-H	HGNC:4965 (HGNC) 3136 (Entrez Gene) HLA-H (Alliance of Genome Resources)	Chr6 p22.1	Chr6:29887573-29891079 (+) GRCh38		P01893 (UniProt \| EBI)
mouse	H2-Q8	MGI:95937 (MGI) 68395 (Entrez Gene) H2-Q8 (Alliance of Genome Resources)	Chr17 Syntenic	Chr17:35737710-35742945 (+) GRCm39		68395 (NCBI Gene Model) P14430 (UniProt \| EBI) NM_001424319 (RefSeq)
rat	RT1-A1	RGD:1595924 (Rat Genome Database) 24973 (Entrez Gene) RT1-A1 (Alliance of Genome Resources)	Chr20 p12			NP_001008827 (RefSeq) NM_001008827 (RefSeq)
	RT1-A2	RGD:1595923 (Rat Genome Database) 24974 (Entrez Gene) RT1-A2 (Alliance of Genome Resources)	Chr20 p12			NP_001008829 (RefSeq) NM_001008829 (RefSeq)
	RT1-CE1	RGD:1595869 (Rat Genome Database) 309603 (Entrez Gene) RT1-CE1 (Alliance of Genome Resources)	Chr20 p12			NP_001008832 (RefSeq) NM_001008832 (RefSeq)
	RT1-CE2	RGD:1598235 (Rat Genome Database) 414779 (Entrez Gene) RT1-CE2 (Alliance of Genome Resources)	Chr20 p12			NP_001008840 (RefSeq) NM_001008840 (RefSeq)
	RT1-CE5	RGD:1595868 (Rat Genome Database) 309607 (Entrez Gene) RT1-CE5 (Alliance of Genome Resources)	Chr20 p12			NP_001029158 (RefSeq) NM_001033986 (RefSeq)
	RT1-CE7	RGD:1595786 (Rat Genome Database) 368153 (Entrez Gene) RT1-CE7 (Alliance of Genome Resources)	Chr20 p12			NP_001008845 (RefSeq) NM_001008845 (RefSeq)
	RT1-CE10	RGD:1359292 (Rat Genome Database) 414792 (Entrez Gene) RT1-CE10 (Alliance of Genome Resources)	Chr20 p12			NP_001008833 (RefSeq) NM_001008833 (RefSeq)
	RT1-CE15	RGD:1359630 (Rat Genome Database) 414789 (Entrez Gene) RT1-CE15 (Alliance of Genome Resources)	Chr20			NP_001008838 (RefSeq) NM_001008838 (RefSeq)
zebrafish	mhc1lea	ZDB-GENE-140820-6 (Zebrafish Model Organism Database) 100150713 (Entrez Gene) mhc1lea (Alliance of Genome Resources)	Chr25			XP_068073540 (RefSeq)
	mhc1lja	ZDB-GENE-140820-11 (Zebrafish Model Organism Database) 100150018 (Entrez Gene) mhc1lja (Alliance of Genome Resources)	Chr25			NP_001314847 (RefSeq) NM_001327918 (RefSeq)
	mhc1zaa	ZDB-GENE-030916-1 (Zebrafish Model Organism Database) 378479 (Entrez Gene) mhc1zaa (Alliance of Genome Resources)	Chr1			NP_919406 (RefSeq) NM_194425 (RefSeq)
	mhc1zba	ZDB-GENE-040426-2149 (Zebrafish Model Organism Database) 791453 (Entrez Gene) mhc1zba (Alliance of Genome Resources)	Chr1			NP_001103588 (RefSeq) NM_001110118 (RefSeq)
	mhc1zca	ZDB-GENE-070424-4 (Zebrafish Model Organism Database) 556341 (Entrez Gene) mhc1zca (Alliance of Genome Resources)	Chr1			NP_001077014 (RefSeq) NM_001083545 (RefSeq)
	mhc1zea	ZDB-GENE-070705-176 (Zebrafish Model Organism Database) 565708 (Entrez Gene) mhc1zea (Alliance of Genome Resources)	Chr1			NP_001083019 (RefSeq) NM_001089550 (RefSeq)
	mhc1zfa	ZDB-GENE-130206-9 (Zebrafish Model Organism Database) 102467220 (Entrez Gene) mhc1zfa (Alliance of Genome Resources)	Chr3			NP_001274027 (RefSeq) NM_001287098 (RefSeq)
	mhc1zja	ZDB-GENE-130206-11 (Zebrafish Model Organism Database) 571647 (Entrez Gene) mhc1zja (Alliance of Genome Resources)	Chr3			NP_001103188 (RefSeq) NM_001109718 (RefSeq)
	mhc1zka	ZDB-GENE-130206-5 (Zebrafish Model Organism Database) 100536229 (Entrez Gene) mhc1zka (Alliance of Genome Resources)	ChrUN			NP_001289174 (RefSeq) NM_001302245 (RefSeq)