Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STMN1	HGNC:6510 (HGNC) 3925 (Entrez Gene) 151442 (OMIM) STMN1 (Alliance of Genome Resources)	Chr1 p36.11	Chr1:25884179-25906991 (-) GRCh38		P16949 (UniProt | EBI) NM_203399 (RefSeq)
mouse	Stmn1	MGI:96739 (MGI) 16765 (Entrez Gene) Gene Tree Stmn1 (Alliance of Genome Resources)	Chr4 66.76 cM	Chr4:134195631-134201154 (+) GRCm39		16765 (NCBI Gene Model) P54227 (UniProt | EBI) NM_001429876 (RefSeq)
rat	Stmn1	RGD:2992 (Rat Genome Database) 29332 (Entrez Gene) Stmn1 (Alliance of Genome Resources)	Chr5 q36			P13668 (UniProt | EBI) NM_001429881 (RefSeq)
zebrafish	stmn1a	ZDB-GENE-031006-14 (Zebrafish Model Organism Database) 678630 (Entrez Gene) stmn1a (Alliance of Genome Resources)	Chr19			NP_001035465 (RefSeq) NM_001040375 (RefSeq)
	stmn1b	ZDB-GENE-050417-397 (Zebrafish Model Organism Database) 550548 (Entrez Gene) stmn1b (Alliance of Genome Resources)	Chr16			NP_001017850 (RefSeq) NM_001017850 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.