Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SYP	HGNC:11506 (HGNC) 6855 (Entrez Gene) 313475 (OMIM) SYP (Alliance of Genome Resources)	ChrX p11.23	ChrX:49187815-49200218 (-) GRCh38	non-syndromic X-linked intellectual disability 96	P08247 (UniProt | EBI) NM_003179 (RefSeq)
mouse	Syp	MGI:98467 (MGI) 20977 (Entrez Gene) Gene Tree Syp (Alliance of Genome Resources)	ChrX 3.44 cM	ChrX:7504819-7519495 (+) GRCm39		20977 (NCBI Gene Model) Q62277 (UniProt | EBI) NM_009305 (RefSeq)
rat	Syp	RGD:3802 (Rat Genome Database) 24804 (Entrez Gene) Syp (Alliance of Genome Resources)	ChrX q12			P07825 (UniProt | EBI) NM_012664 (RefSeq)
zebrafish	sypa	ZDB-GENE-031104-2 (Zebrafish Model Organism Database) 559698 (Entrez Gene) sypa (Alliance of Genome Resources)	Chr8			NP_001137449 (RefSeq) NM_001143977 (RefSeq)
	sypb	ZDB-GENE-040718-205 (Zebrafish Model Organism Database) 436774 (Entrez Gene) sypb (Alliance of Genome Resources)	Chr8			NP_001025413 (RefSeq) NM_001030242 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.